FreeBSD/ports 490769head/science/octopus files, head/science/octopus/files patch-configure patch-external__libs_Makefile.in

science/octopus: patches

LLVM/llvm 351670libcxx/trunk/test/std/language.support/support.dynamic/new.delete/new.delete.array delete_align_val_t_replace.pass.cpp new_align_val_t.pass.cpp, libcxx/trunk/test/std/language.support/support.dynamic/new.delete/new.delete.single delete_align_val_t_replace.pass.cpp new_align_val_t.pass.cpp

Fix aligned allocation availability XFAILs after D56445.

D56445 bumped the minimum Mac OS X version required for aligned
allocation from 10.13 to 10.14. This caused libc++ tests depending
on the old value to break.

This patch updates the XFAILs for those tests to include 10.13.

LLVM/llvm 351669libcxx/trunk/test/std/language.support/support.dynamic/new.delete/new.delete.array delete_align_val_t_replace.pass.cpp new_align_val_t.pass.cpp, libcxx/trunk/test/std/language.support/support.dynamic/new.delete/new.delete.single delete_align_val_t_replace.pass.cpp new_align_val_t.pass.cpp

Revert "Fix aligned allocation availability XFAILs after D56445."

This reverts commit r351625.

That fix was incomplete. I'm reverting so I can commit a complete fix
in a single revision.

FreeBSD/ports 490768head/www/joomla3 distinfo Makefile

www/joomla3: Update to 3.9.2.

Release notes: 
https://www.joomla.org/announcements/release-news/5755-joomla-3-9-2-release.html

MFH:           2019Q1
Security:       6aa398d0-1c4d-11e9-96dd-a4badb296695

FreeBSD/ports 490767head/security/vuxml vuln.xml

security/vuxml: Document joomla 3 vulnerabilities.

FreeBSD/ports 490766head/science/octopus pkg-plist Makefile

science/octopus: Unbundle spglib; Add OPENMP option that makes it parallelized by default

FreeBSD/src 343205stable 12, stable/12/usr.bin/cmp cmp.c

MFC r343117:
Fix handling of rights on stdio streams.

PR:     234885

LLVM/llvm 351668llvm/trunk/utils/lit/lit TestRunner.py, llvm/trunk/utils/lit/tests/Inputs/testrunner-custom-parsers test.txt

make XFAIL, REQUIRES, and UNSUPPORTED support multi-line expressions

FreeBSD/src 343204head/sbin/ifconfig ifieee80211.c, head/sys/net80211 ieee80211_wps.h ieee80211.h

[ifconfig] Print more WPS attributes in verbose "list scan" output

- Move WPS related defines to dedicated file
- Add handlers for more WPS attributes

PR:            217317
Submitted by:   J.R. Oldroyd <fbsd at opal.com>
MFC after:      3 weeks

HardenedBSD/hardenedbsd 7626b29sys/dev/ixgbe ixgbe_common.c ixgbe_82599.c, usr.bin/rpcgen Makefile

Merge remote-tracking branch 'origin/hardened/current/master' into 
hardened/current/unstable

* origin/hardened/current/master:
  ixgbe: this statement may fall through warnings with gcc
  HBSD: Disable cfi-icall for NFS RPC utilities

HardenedBSD/hardenedbsd e08dbb4sys/dev/ixgbe ixgbe_common.c ixgbe_82599.c

Merge branch 'freebsd/current/master' into hardened/current/master

* freebsd/current/master:
  ixgbe: this statement may fall through warnings with gcc

FreeBSD/ports 490765head/audio Makefile spotifyd, head/audio/spotifyd distinfo Makefile

New port: audio/spotifyd

An open source Spotify client running as a UNIX daemon.  Spotifyd
streams music just like the official client, but is more lightweight
and supports more platforms.  Spotifyd also supports the Spotify
Connect protocol which makes it show up as a device that can be
controlled from the official clients.

Spotifyd requires a Spotify Premium account.

WWW: https://github.com/Spotifyd/spotifyd

XigmaNAS/svn 6393trunk/etc/inc zfs.inc

Enable feature flags up to FreeBSD 11.2.
DeltaFile
+245-104trunk/etc/inc/zfs.inc
+245-1041 files

LLVM/llvm 351667libcxx/trunk/utils/docker build_docker_image.sh, libcxx/trunk/utils/docker/debian9 Dockerfile

Improve docker images and configuration; create compiler-zoo image

OpenBSD/ports n0insnMx11/py-qtpy Makefile distinfo, x11/py-qtpy/pkg PLIST

   Updating py-qtpy from 1.5.2 to 1.6.0

   OK danj@

NetBSD/pkgsrc wettKlPgraphics/MesaLib18 distinfo Makefile, graphics/MesaLib18/patches patch-src_glx_Makefile.am

   Revert previous for OSX, it's still needed. Document the reason why in patch.

NetBSD/pkgsrc 8TtGPCDdoc CHANGES-2019

   doc: Updated security/pinentry-gtk2 to 1.1.0nb5
VersionDeltaFile
1.324+2-1doc/CHANGES-2019
+2-11 files

NetBSD/pkgsrc EPzQUNMsecurity/pinentry-gtk2 Makefile DESCR

   pinentry-gtk2: update to 1.1.0nb5.

   Explicitly disable some optional dependencies.
   Update COMMENT and DESCR.

   From Michael Bäuerle via pkgsrc-wip.

Linux/linux 5d5c303arch/mips/bcm47xx setup.c, arch/mips/cavium-octeon setup.c

Merge tag 'mips_fixes_5.0_2' of git://git.kernel.org/pub/scm/linux/kernel/git/mips/linux

Pull MIPS fixes from Paul Burton:

 - Fix IPI handling for Lantiq SoCs, which was broken by changes made
   back in v4.12.

 - Enable OF/DT serial support in ath79_defconfig to give us working
   serial by default.

 - Fix 64b builds for the Jazz platform.

 - Set up a struct device for the BCM47xx SoC to allow BCM47xx drivers
   to perform DMA again following the major DMA mapping changes made in
   v4.19.

 - Disable MSI on Cavium Octeon systems when the pcie_disable command
   line parameter introduced in v3.3 is used, in order to avoid
   inadvetently accessing PCIe controller registers despite the command
   line.

 - Fix a build failure for Cavium Octeon kernels with kexec enabled,
   introduced in v4.20.

 - Fix a regression in the behaviour of semctl/shmctl/msgctl IPC

    [12 lines not shown]

OpenBSD/src o2rgqilusr.bin/ssh serverloop.c

   fix error in refactor: use ssh_packet_disconnect() instead of
   sshpkt_error(). The first one logs the error and exits (what we want)
   instead of just logging and blundering on.
VersionDeltaFile
1.213+6-4usr.bin/ssh/serverloop.c
+6-41 files

Linux/linux 6a0141aarch/powerpc/platforms/chrp setup.c

Merge tag 'devicetree-fixes-for-5.0-2' of 
git://git.kernel.org/pub/scm/linux/kernel/git/robh/linux

Pull Devicetree fix from Rob Herring:
 "A single build fix for powerpc due to device_node.type removal"

* tag 'devicetree-fixes-for-5.0-2' of 
git://git.kernel.org/pub/scm/linux/kernel/git/robh/linux:
  powerpc: chrp: Use of_node_is_type to access device_type

Linux/linux 26caabbdrivers/acpi/nfit core.c intel.c, drivers/nvdimm nd-core.h

Merge tag 'libnvdimm-fixes-5.0-rc3' of 
git://git.kernel.org/pub/scm/linux/kernel/git/nvdimm/nvdimm

Pull libnvdimm fixes from Dan Williams:
 "A crash fix, a build warning fix, a miscellaneous small cleanups.

  In case anyone is looking for them, there was a regression caught by
  testing that caused two patches to be dropped from this update.  Those
  patches have been reworked and will soak for another week / re-target
  5.0-rc4.

   - Fix driver initialization crash due to the inability to report an
     'error' state for a DIMM's security capability.

   - Build warning fix for little-endian ARM64 builds

   - Fix a potential race between the EDAC driver's usage of the NFIT
     SMBIOS id for a DIMM and the driver shutdown path.

   - A small collection of one-line benign cleanups for duplicate
     variable assignments, a duplicate header include and a mis-typed
     function argument"

* tag 'libnvdimm-fixes-5.0-rc3' of 
git://git.kernel.org/pub/scm/linux/kernel/git/nvdimm/nvdimm:

    [7 lines not shown]

FreeBSD/ports 490764head/sysutils/eksctl distinfo Makefile

- Update to 0.1.19

NetBSD/pkgsrc YUZUnepgraphics/MesaLib18 distinfo Makefile, graphics/MesaLib18/patches patch-src_glx_Makefile.am

   MesaLib18: patch for FDO bug 90311 appears no longer needed

FreeBSD/ports 490763head/net/openmpi2 distinfo pkg-plist

- Update to 2.1.6

FreeBSD/ports 490762branches 2019Q1, branches/2019Q1/sysutils/helm distinfo Makefile

MFH: r490608

- Update to 2.12.2

It is a security release: https://helm.sh/blog/helm-security-notice-2019/index.html

Approved by:    portmgr (miwi)

Linux/linux f403d71drivers/watchdog tqmx86_wdt.c mt7621_wdt.c

Merge tag 'linux-watchdog-5.0-rc-fixes' of git://www.linux-watchdog.org/linux-watchdog

Pull watchdog fixes from Wim Van Sebroeck:

 - mt7621_wdt/rt2880_wdt: Fix compilation problem

 - tqmx86: Fix a couple IS_ERR() vs NULL bugs

* tag 'linux-watchdog-5.0-rc-fixes' of git://www.linux-watchdog.org/linux-watchdog:
  watchdog: tqmx86: Fix a couple IS_ERR() vs NULL bugs
  watchdog: mt7621_wdt/rt2880_wdt: Fix compilation problem

NetBSD/pkgsrc TWbSNbpdoc CHANGES-pkgsrc-2018Q4

   Document latest pullup tickets
VersionDeltaFile
1.1.2.3+16-1doc/CHANGES-pkgsrc-2018Q4
+16-11 files

NetBSD/pkgsrc 4RkfOJvlang/php phpversion.mk, lang/php56 distinfo Makefile

   Pullup ticket #5899 - requested by taca
   lang/php56: security fix

   Revisions pulled up:
   - lang/php/phpversion.mk                                        1.245
   - lang/php56/Makefile                                           1.20
   - lang/php56/distinfo                                           1.54

   ---
      Module Name:      pkgsrc
      Committed By:     taca
      Date:            Sat Jan 12 15:01:34 UTC 2019

      Modified Files:
        pkgsrc/lang/php: phpversion.mk
        pkgsrc/lang/php56: Makefile distinfo

      Log Message:
      lang/php56: udate to 5.6.40

      10 Jan 2019, PHP 5.6.40

      - GD:
        . Fixed bug #77269 (efree() on uninitialized Heap data in imagescale leads to
          use-after-free). (cmb)

    [19 lines not shown]
VersionDeltaFile
1.53.2.1+5-5lang/php56/distinfo
1.241.2.4+2-2lang/php/phpversion.mk
1.19.2.1+1-2lang/php56/Makefile
+8-93 files

NetBSD/pkgsrc 78JBYJYgraphics/MesaLib18 PLIST options.mk, graphics/MesaLib18/patches patch-src_glx_Makefile.am patch-src_glx_dri__common.h

   MesaLib18: fix build on Mac OS X

   Tested with x11/modular-xorg-xquartz on Mojave.

NetBSD/pkgsrc B0lKxRNlang/php phpversion.mk, lang/php73 distinfo

   Pullup ticket #5898 - requested by taca
   lang/php73: security fix

   Revisions pulled up:
   - lang/php/phpversion.mk                                        1.244
   - lang/php73/distinfo                                           1.2

   ---
      Module Name:    pkgsrc
      Committed By:   taca
      Date:           Sat Jan 12 15:00:26 UTC 2019

      Modified Files:
              pkgsrc/lang/php: phpversion.mk
              pkgsrc/lang/php73: distinfo

      Log Message:
      lang/php73: update to 7.3.1

      10 Jan 2019, PHP 7.3.1

      - Core:
        . Fixed bug #76654 (Build failure on Mac OS X on 32-bit Intel). (Ryandesign)
        . Fixed bug #71041 (zend_signal_startup() needs ZEND_API).
          (Valentin V. Bartenev)

    [82 lines not shown]
VersionDeltaFile
1.1.2.1+4-4lang/php73/distinfo
1.241.2.3+2-2lang/php/phpversion.mk
+6-62 files

OpenBSD/src QAeEowwshare/man/man4 simplefb.4

   typo: "wsdisplay* at simlefb?" -> "wsdisplay* at simplefb?"
VersionDeltaFile
1.2+3-3share/man/man4/simplefb.4
+3-31 files

OpenBSD/src SszKJYAusr.bin/ssh dispatch.h Makefile.inc

   remove last traces of old packet API!

   with & ok markus@

NetBSD/pkgsrc Iiz9dDwlang/php phpversion.mk, lang/php72 distinfo Makefile

   Pullup ticket #5897 - requested by taca
   lang/php72: security fix

   Revisions pulled up:
   - lang/php/phpversion.mk                                        1.243
   - lang/php72/Makefile                                           1.16
   - lang/php72/distinfo                                           1.35

   ---
      Module Name:      pkgsrc
      Committed By:     taca
      Date:            Sat Jan 12 14:59:03 UTC 2019

      Modified Files:
        pkgsrc/lang/php: phpversion.mk
        pkgsrc/lang/php72: Makefile distinfo

      Log Message:
      lang/php72: update to 7.2.14

      10 Jan 2019, PHP 7.2.14

      - Core:
        . Fixed bug #77369 (memcpy with negative length via crafted DNS response). (Stas)
        . Fixed bug #71041 (zend_signal_startup() needs ZEND_API).

    [65 lines not shown]
VersionDeltaFile
1.34.2.1+5-5lang/php72/distinfo
1.241.2.2+2-2lang/php/phpversion.mk
1.15.2.1+1-2lang/php72/Makefile
+8-93 files

NetBSD/src 5FWyMNKsys/arch/arm/dts meson8b.dtsi meson8b-odroidc1.dts

   Add (non-standard) fb node for meson8b

OpenBSD/src K4STdvFusr.bin/ssh sshd.c ssh_api.c

   remove last references to active_state

   with & ok markus@

NetBSD/src S8hBmUCsys/arch/arm/amlogic meson_genfb.c meson_vpureg.h

   Add Meson (FDT) framebuffer support.

OpenBSD/src nK0vxTtusr.bin/ssh monitor.c monitor.h

   convert monitor.c to new packet API

   with & ok markus@

NetBSD/src q3tkbyZsys/arch/evbarm/conf GENERIC

   Add WSDISPLAY_MULTICONS
VersionDeltaFile
1.20+2-1sys/arch/evbarm/conf/GENERIC
+2-11 files

OpenBSD/src 0w6504Yusr.bin/ssh sshd.c

   convert sshd.c to new packet API

   with & ok markus@
VersionDeltaFile
1.525+39-30usr.bin/ssh/sshd.c
+39-301 files

OpenBSD/src QqGPqwRusr.bin/ssh session.c

   convert session.c to new packet API

   with & ok markus@
VersionDeltaFile
1.312+84-60usr.bin/ssh/session.c
+84-601 files

OpenBSD/src wBJDg5Xusr.bin/ssh auth.c auth.h

   convert auth.c to new packet API

   with & ok markus@

OpenBSD/src c0PMnKRusr.bin/ssh serverloop.c

   convert serverloop.c to new packet API

   with & ok markus@
VersionDeltaFile
1.211+205-153usr.bin/ssh/serverloop.c
+205-1531 files

OpenBSD/src QDWWOeEusr.bin/ssh sshconnect2.c

   convert the remainder of sshconnect2.c to new packet API

   with & ok markus@
VersionDeltaFile
1.295+46-49usr.bin/ssh/sshconnect2.c
+46-491 files

OpenBSD/src VZ2wPoJusr.bin/ssh clientloop.c

   convert the remainder of clientloop.c to new packet API

   with & ok markus@
VersionDeltaFile
1.321+31-34usr.bin/ssh/clientloop.c
+31-341 files

OpenBSD/src xG8kCYiusr.bin/ssh auth2.c sshd.c

   convert auth2.c to new packet API
VersionDeltaFile
1.153+54-43usr.bin/ssh/auth2.c
1.524+3-2usr.bin/ssh/sshd.c
1.97+2-2usr.bin/ssh/auth.h
+59-473 files

OpenBSD/src 91sJ4fUusr.bin/ssh servconf.c sshd.c

   convert servconf.c to new packet API

   with & ok markus@
VersionDeltaFile
1.346+3-7usr.bin/ssh/servconf.c
1.523+3-3usr.bin/ssh/sshd.c
1.137+3-2usr.bin/ssh/auth.c
1.139+2-2usr.bin/ssh/servconf.h
+11-144 files

OpenBSD/ports eefEWc1print/cups Makefile, print/cups/pkg cupsd.rc

   Expand comment.
VersionDeltaFile
1.30+5-3print/cups/pkg/cupsd.rc
1.245+3-1print/cups/Makefile
+8-42 files

OpenBSD/src lAAVNHdusr.bin/ssh channels.c

   convert channels.c to new packet API

   with & ok markus@
VersionDeltaFile
1.389+38-30usr.bin/ssh/channels.c
+38-301 files

OpenBSD/src hz2syO7usr.bin/ssh sshconnect.c sshconnect.h

   convert sshconnect.c to new packet API

   with & ok markus@
VersionDeltaFile
1.311+1-22usr.bin/ssh/sshconnect.c
1.37+1-2usr.bin/ssh/sshconnect.h
+2-242 files